Function for repositioning pre-joined atlas data (i.e. data and atlas already joined to a single data frame). This makes it possible for users to reposition the geometry data for the atlas for control over final plot layout. For even more detailed control over the positioning, the "hemi" and "side" columns should be converted into factors and ordered by wanted order of appearance.
reposition_brain(data, position = "horizontal")sf-data.frame of joined brain atlas and data
position formula for slices
sf-data.frame with repositioned slices
reposition_brain(dk, hemi ~ side)
#> Simple feature collection with 90 features and 7 fields
#> Geometry type: MULTIPOLYGON
#> Dimension: XY
#> Bounding box: xmin: -6.721809 ymin: -6.721809 xmax: 678.9027 ymax: 458.6913
#> CRS: NA
#> # A tibble: 90 × 8
#> atlas type hemi side region label roi geometry
#> * <chr> <chr> <chr> <chr> <chr> <chr> <chr> <MULTIPOLYGON>
#> 1 dk cortical left lateral NA NA 0001 (((84.32563 34.46407, 84…
#> 2 dk cortical left lateral bankssts lh_b… 0002 (((214.8215 108.8139, 21…
#> 3 dk cortical left lateral caudal mi… lh_c… 0004 (((106.16 184.3144, 93.6…
#> 4 dk cortical left lateral fusiform lh_f… 0008 (((256.5481 48.35713, 24…
#> 5 dk cortical left lateral inferior … lh_i… 0009 (((218.4373 161.6233, 21…
#> 6 dk cortical left lateral inferior … lh_i… 0010 (((250.7745 70.75764, 24…
#> 7 dk cortical left lateral lateral o… lh_l… 0012 (((277.4615 115.0523, 27…
#> 8 dk cortical left lateral lateral o… lh_l… 0013 (((66.26648 69.56474, 56…
#> 9 dk cortical left lateral middle te… lh_m… 0016 (((238.0128 91.25816, 23…
#> 10 dk cortical left lateral pars oper… lh_p… 0019 (((79.03391 126.496, 74.…
#> # ℹ 80 more rows
reposition_brain(dk, side ~ hemi)
#> Simple feature collection with 90 features and 7 fields
#> Geometry type: MULTIPOLYGON
#> Dimension: XY
#> Bounding box: xmin: -6.713058 ymin: -6.713058 xmax: 678.0189 ymax: 454.7964
#> CRS: NA
#> # A tibble: 90 × 8
#> atlas type hemi side region label roi geometry
#> * <chr> <chr> <chr> <chr> <chr> <chr> <chr> <MULTIPOLYGON>
#> 1 dk cortical left lateral NA NA 0001 (((84.32563 34.46407, 84…
#> 2 dk cortical left lateral bankssts lh_b… 0002 (((214.8215 108.8139, 21…
#> 3 dk cortical left lateral caudal mi… lh_c… 0004 (((106.16 184.3144, 93.6…
#> 4 dk cortical left lateral fusiform lh_f… 0008 (((256.5481 48.35713, 24…
#> 5 dk cortical left lateral inferior … lh_i… 0009 (((218.4373 161.6233, 21…
#> 6 dk cortical left lateral inferior … lh_i… 0010 (((250.7745 70.75764, 24…
#> 7 dk cortical left lateral lateral o… lh_l… 0012 (((277.4615 115.0523, 27…
#> 8 dk cortical left lateral lateral o… lh_l… 0013 (((66.26648 69.56474, 56…
#> 9 dk cortical left lateral middle te… lh_m… 0016 (((238.0128 91.25816, 23…
#> 10 dk cortical left lateral pars oper… lh_p… 0019 (((79.03391 126.496, 74.…
#> # ℹ 80 more rows
reposition_brain(dk, hemi + side ~ .)
#> Simple feature collection with 90 features and 7 fields
#> Geometry type: MULTIPOLYGON
#> Dimension: XY
#> Bounding box: xmin: -9.41141 ymin: -9.41141 xmax: 314.9482 ymax: 950.5524
#> CRS: NA
#> # A tibble: 90 × 8
#> atlas type hemi side region label roi geometry
#> * <chr> <chr> <chr> <chr> <chr> <chr> <chr> <MULTIPOLYGON>
#> 1 dk cortical left lateral NA NA 0001 (((84.32563 34.46407, 84…
#> 2 dk cortical left lateral bankssts lh_b… 0002 (((214.8215 108.8139, 21…
#> 3 dk cortical left lateral caudal mi… lh_c… 0004 (((106.16 184.3144, 93.6…
#> 4 dk cortical left lateral fusiform lh_f… 0008 (((256.5481 48.35713, 24…
#> 5 dk cortical left lateral inferior … lh_i… 0009 (((218.4373 161.6233, 21…
#> 6 dk cortical left lateral inferior … lh_i… 0010 (((250.7745 70.75764, 24…
#> 7 dk cortical left lateral lateral o… lh_l… 0012 (((277.4615 115.0523, 27…
#> 8 dk cortical left lateral lateral o… lh_l… 0013 (((66.26648 69.56474, 56…
#> 9 dk cortical left lateral middle te… lh_m… 0016 (((238.0128 91.25816, 23…
#> 10 dk cortical left lateral pars oper… lh_p… 0019 (((79.03391 126.496, 74.…
#> # ℹ 80 more rows
reposition_brain(dk, . ~ hemi + side)
#> Simple feature collection with 90 features and 7 fields
#> Geometry type: MULTIPOLYGON
#> Dimension: XY
#> Bounding box: xmin: -14.04594 ymin: -14.04594 xmax: 1418.64 ymax: 219.4866
#> CRS: NA
#> # A tibble: 90 × 8
#> atlas type hemi side region label roi geometry
#> * <chr> <chr> <chr> <chr> <chr> <chr> <chr> <MULTIPOLYGON>
#> 1 dk cortical left lateral NA NA 0001 (((84.32563 34.46407, 84…
#> 2 dk cortical left lateral bankssts lh_b… 0002 (((214.8215 108.8139, 21…
#> 3 dk cortical left lateral caudal mi… lh_c… 0004 (((106.16 184.3144, 93.6…
#> 4 dk cortical left lateral fusiform lh_f… 0008 (((256.5481 48.35713, 24…
#> 5 dk cortical left lateral inferior … lh_i… 0009 (((218.4373 161.6233, 21…
#> 6 dk cortical left lateral inferior … lh_i… 0010 (((250.7745 70.75764, 24…
#> 7 dk cortical left lateral lateral o… lh_l… 0012 (((277.4615 115.0523, 27…
#> 8 dk cortical left lateral lateral o… lh_l… 0013 (((66.26648 69.56474, 56…
#> 9 dk cortical left lateral middle te… lh_m… 0016 (((238.0128 91.25816, 23…
#> 10 dk cortical left lateral pars oper… lh_p… 0019 (((79.03391 126.496, 74.…
#> # ℹ 80 more rows